4968939 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 duplicates 4968939 + 0 mapped (100.00%:-nan%) 4968939 + 0 paired in sequencing 2752586 + 0 read1 2216353 + 0 read2 2720330 + 0 properly paired (54.75%:-nan%) 4310544 + 0 with itself and mate mapped 658395 + 0 singletons (13.25%:-nan%) 403170 + 0 with mate mapped to a different chr 0 + 0 with mate mapped to a different chr (mapQ>=5)