Left reads: Input : 16298947 Mapped : 12264498 (75.2% of input) of these: 1188329 ( 9.7%) have multiple alignments (19757 have >20) Right reads: Input : 16298947 Mapped : 10189257 (62.5% of input) of these: 985342 ( 9.7%) have multiple alignments (19749 have >20) 68.9% overall read mapping rate. Aligned pairs: 9920729 of these: 963143 ( 9.7%) have multiple alignments 41762 ( 0.4%) are discordant alignments 60.6% concordant pair alignment rate.