40691946 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 duplicates 40691946 + 0 mapped (100.00%:-nan%) 40691946 + 0 paired in sequencing 22188325 + 0 read1 18503621 + 0 read2 27977106 + 0 properly paired (68.75%:-nan%) 36012770 + 0 with itself and mate mapped 4679176 + 0 singletons (11.50%:-nan%) 502664 + 0 with mate mapped to a different chr 26516 + 0 with mate mapped to a different chr (mapQ>=5)