5710639 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 duplicates 5710639 + 0 mapped (100.00%:-nan%) 5710639 + 0 paired in sequencing 3077892 + 0 read1 2632747 + 0 read2 4490192 + 0 properly paired (78.63%:-nan%) 4989226 + 0 with itself and mate mapped 721413 + 0 singletons (12.63%:-nan%) 197088 + 0 with mate mapped to a different chr 0 + 0 with mate mapped to a different chr (mapQ>=5)