41931436 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 duplicates 41931436 + 0 mapped (100.00%:-nan%) 41931436 + 0 paired in sequencing 22028440 + 0 read1 19902996 + 0 read2 22051804 + 0 properly paired (52.59%:-nan%) 39012152 + 0 with itself and mate mapped 2919284 + 0 singletons (6.96%:-nan%) 816258 + 0 with mate mapped to a different chr 459280 + 0 with mate mapped to a different chr (mapQ>=5)