Left reads: Input : 9018095 Mapped : 7631484 (84.6% of input) of these: 956733 (12.5%) have multiple alignments (104539 have >20) Right reads: Input : 9018095 Mapped : 6209243 (68.9% of input) of these: 762341 (12.3%) have multiple alignments (104088 have >20) 76.7% overall read mapping rate. Aligned pairs: 6041334 of these: 735087 (12.2%) have multiple alignments 153125 ( 2.5%) are discordant alignments 65.3% concordant pair alignment rate.