10518710 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 duplicates 10518710 + 0 mapped (100.00%:-nan%) 10518710 + 0 paired in sequencing 5458735 + 0 read1 5059975 + 0 read2 3452188 + 0 properly paired (32.82%:-nan%) 9874754 + 0 with itself and mate mapped 643956 + 0 singletons (6.12%:-nan%) 1662348 + 0 with mate mapped to a different chr 0 + 0 with mate mapped to a different chr (mapQ>=5)