40809145 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 duplicates 40809145 + 0 mapped (100.00%:-nan%) 40809145 + 0 paired in sequencing 21136290 + 0 read1 19672855 + 0 read2 19060782 + 0 properly paired (46.71%:-nan%) 38573912 + 0 with itself and mate mapped 2235233 + 0 singletons (5.48%:-nan%) 2264908 + 0 with mate mapped to a different chr 355342 + 0 with mate mapped to a different chr (mapQ>=5)