12977702 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 duplicates 12977702 + 0 mapped (100.00%:-nan%) 12977702 + 0 paired in sequencing 6714224 + 0 read1 6263478 + 0 read2 3712084 + 0 properly paired (28.60%:-nan%) 12273972 + 0 with itself and mate mapped 703730 + 0 singletons (5.42%:-nan%) 2073850 + 0 with mate mapped to a different chr 0 + 0 with mate mapped to a different chr (mapQ>=5)