46967971 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 duplicates 46967971 + 0 mapped (100.00%:-nan%) 46967971 + 0 paired in sequencing 24228105 + 0 read1 22739866 + 0 read2 19541730 + 0 properly paired (41.61%:-nan%) 44679794 + 0 with itself and mate mapped 2288177 + 0 singletons (4.87%:-nan%) 2599754 + 0 with mate mapped to a different chr 286644 + 0 with mate mapped to a different chr (mapQ>=5)