18499544 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 duplicates 18499544 + 0 mapped (100.00%:-nan%) 18499544 + 0 paired in sequencing 9506469 + 0 read1 8993075 + 0 read2 5805070 + 0 properly paired (31.38%:-nan%) 17663088 + 0 with itself and mate mapped 836456 + 0 singletons (4.52%:-nan%) 2565920 + 0 with mate mapped to a different chr 0 + 0 with mate mapped to a different chr (mapQ>=5)