Left reads: Input : 15728253 Mapped : 14181017 (90.2% of input) of these: 1278379 ( 9.0%) have multiple alignments (75401 have >20) Right reads: Input : 15728253 Mapped : 13110903 (83.4% of input) of these: 1162871 ( 8.9%) have multiple alignments (75057 have >20) 86.8% overall read mapping rate. Aligned pairs: 12811498 of these: 1124149 ( 8.8%) have multiple alignments 381062 ( 3.0%) are discordant alignments 79.0% concordant pair alignment rate.