Left reads: Input : 16565333 Mapped : 15218333 (91.9% of input) of these: 1254390 ( 8.2%) have multiple alignments (71711 have >20) Right reads: Input : 16565333 Mapped : 13510275 (81.6% of input) of these: 1087678 ( 8.1%) have multiple alignments (71132 have >20) 86.7% overall read mapping rate. Aligned pairs: 13269749 of these: 1063116 ( 8.0%) have multiple alignments 302626 ( 2.3%) are discordant alignments 78.3% concordant pair alignment rate.