Left reads: Input : 49853251 Mapped : 46444152 (93.2% of input) of these: 7080258 (15.2%) have multiple alignments (1110843 have >20) Right reads: Input : 49853251 Mapped : 45924416 (92.1% of input) of these: 7003395 (15.2%) have multiple alignments (1105673 have >20) 92.6% overall read mapping rate. Aligned pairs: 44689764 of these: 6827487 (15.3%) have multiple alignments 360204 ( 0.8%) are discordant alignments 88.9% concordant pair alignment rate.