FastQCFastQC Report
Fri 28 Jun 2019
SRR6080067_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR6080067_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49853251
Sequences flagged as poor quality0
Sequence length101
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGAATTGGACTTCTCAGTGAGACAGGATGGAATGCAGATCACAGAATT718700.14416311586179206No Hit
CTTTCTTATGGCTCATCTCATTAACGAAAAGGATGGGGAAACCTTCCAGC545140.10934893694294881No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.7)