Left reads: Input : 49172159 Mapped : 45788930 (93.1% of input) of these: 4690475 (10.2%) have multiple alignments (346394 have >20) Right reads: Input : 49172159 Mapped : 45191593 (91.9% of input) of these: 4614436 (10.2%) have multiple alignments (344308 have >20) 92.5% overall read mapping rate. Aligned pairs: 44042272 of these: 4482237 (10.2%) have multiple alignments 297972 ( 0.7%) are discordant alignments 89.0% concordant pair alignment rate.