Left reads: Input : 32370267 Mapped : 29697266 (91.7% of input) of these: 3621051 (12.2%) have multiple alignments (334747 have >20) Right reads: Input : 32370267 Mapped : 28491799 (88.0% of input) of these: 3475837 (12.2%) have multiple alignments (330535 have >20) 89.9% overall read mapping rate. Aligned pairs: 27672381 of these: 3366769 (12.2%) have multiple alignments 214406 ( 0.8%) are discordant alignments 84.8% concordant pair alignment rate.