Left reads: Input : 59348866 Mapped : 54212508 (91.3% of input) of these: 4129947 ( 7.6%) have multiple alignments (85966 have >20) Right reads: Input : 59348866 Mapped : 52773399 (88.9% of input) of these: 3964971 ( 7.5%) have multiple alignments (85265 have >20) 90.1% overall read mapping rate. Aligned pairs: 49414145 of these: 3506735 ( 7.1%) have multiple alignments 4042608 ( 8.2%) are discordant alignments 76.4% concordant pair alignment rate.