Left reads: Input : 102538 Mapped : 80031 (78.1% of input) of these: 4240 ( 5.3%) have multiple alignments (391 have >20) Right reads: Input : 102538 Mapped : 76918 (75.0% of input) of these: 4141 ( 5.4%) have multiple alignments (391 have >20) 76.5% overall read mapping rate. Aligned pairs: 66710 of these: 3687 ( 5.5%) have multiple alignments 1427 ( 2.1%) are discordant alignments 63.7% concordant pair alignment rate.