400698 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 duplicates 400698 + 0 mapped (100.00%:-nan%) 400698 + 0 paired in sequencing 204651 + 0 read1 196047 + 0 read2 126256 + 0 properly paired (31.51%:-nan%) 342436 + 0 with itself and mate mapped 58262 + 0 singletons (14.54%:-nan%) 6680 + 0 with mate mapped to a different chr 2848 + 0 with mate mapped to a different chr (mapQ>=5)