200254 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 duplicates 200254 + 0 mapped (100.00%:-nan%) 200254 + 0 paired in sequencing 102315 + 0 read1 97939 + 0 read2 59278 + 0 properly paired (29.60%:-nan%) 167156 + 0 with itself and mate mapped 33098 + 0 singletons (16.53%:-nan%) 2120 + 0 with mate mapped to a different chr 1080 + 0 with mate mapped to a different chr (mapQ>=5)