Left reads: Input : 127428 Mapped : 102315 (80.3% of input) of these: 3375 ( 3.3%) have multiple alignments (119 have >20) Right reads: Input : 127428 Mapped : 97939 (76.9% of input) of these: 3278 ( 3.3%) have multiple alignments (119 have >20) 78.6% overall read mapping rate. Aligned pairs: 83578 of these: 2737 ( 3.3%) have multiple alignments 1634 ( 2.0%) are discordant alignments 64.3% concordant pair alignment rate.