608800 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 duplicates 608800 + 0 mapped (100.00%:-nan%) 608800 + 0 paired in sequencing 313113 + 0 read1 295687 + 0 read2 161476 + 0 properly paired (26.52%:-nan%) 521092 + 0 with itself and mate mapped 87708 + 0 singletons (14.41%:-nan%) 8662 + 0 with mate mapped to a different chr 4010 + 0 with mate mapped to a different chr (mapQ>=5)