Left reads: Input : 372726 Mapped : 313113 (84.0% of input) of these: 13531 ( 4.3%) have multiple alignments (971 have >20) Right reads: Input : 372726 Mapped : 295687 (79.3% of input) of these: 12906 ( 4.4%) have multiple alignments (971 have >20) 81.7% overall read mapping rate. Aligned pairs: 260546 of these: 11350 ( 4.4%) have multiple alignments 6826 ( 2.6%) are discordant alignments 68.1% concordant pair alignment rate.