Left reads: Input : 250333 Mapped : 204651 (81.8% of input) of these: 15260 ( 7.5%) have multiple alignments (206 have >20) Right reads: Input : 250333 Mapped : 196047 (78.3% of input) of these: 14679 ( 7.5%) have multiple alignments (206 have >20) 80.0% overall read mapping rate. Aligned pairs: 171218 of these: 12979 ( 7.6%) have multiple alignments 5486 ( 3.2%) are discordant alignments 66.2% concordant pair alignment rate.