Left reads: Input : 96419 Mapped : 75928 (78.7% of input) of these: 4718 ( 6.2%) have multiple alignments (534 have >20) Right reads: Input : 96419 Mapped : 75202 (78.0% of input) of these: 4675 ( 6.2%) have multiple alignments (534 have >20) 78.4% overall read mapping rate. Aligned pairs: 66319 of these: 4154 ( 6.3%) have multiple alignments 1496 ( 2.3%) are discordant alignments 67.2% concordant pair alignment rate.