Left reads: Input : 284223 Mapped : 201600 (70.9% of input) of these: 26313 (13.1%) have multiple alignments (983 have >20) Right reads: Input : 284223 Mapped : 190703 (67.1% of input) of these: 24950 (13.1%) have multiple alignments (983 have >20) 69.0% overall read mapping rate. Aligned pairs: 165237 of these: 22517 (13.6%) have multiple alignments 2489 ( 1.5%) are discordant alignments 57.3% concordant pair alignment rate.