Left reads: Input : 464506 Mapped : 372921 (80.3% of input) of these: 23830 ( 6.4%) have multiple alignments (1482 have >20) Right reads: Input : 464506 Mapped : 364227 (78.4% of input) of these: 23427 ( 6.4%) have multiple alignments (1482 have >20) 79.3% overall read mapping rate. Aligned pairs: 318725 of these: 20894 ( 6.6%) have multiple alignments 5471 ( 1.7%) are discordant alignments 67.4% concordant pair alignment rate.