Left reads: Input : 286973 Mapped : 219096 (76.3% of input) of these: 8048 ( 3.7%) have multiple alignments (965 have >20) Right reads: Input : 286973 Mapped : 231495 (80.7% of input) of these: 8410 ( 3.6%) have multiple alignments (965 have >20) 78.5% overall read mapping rate. Aligned pairs: 188717 of these: 6922 ( 3.7%) have multiple alignments 3791 ( 2.0%) are discordant alignments 64.4% concordant pair alignment rate.