Left reads: Input : 386377 Mapped : 317271 (82.1% of input) of these: 9185 ( 2.9%) have multiple alignments (860 have >20) Right reads: Input : 386377 Mapped : 304500 (78.8% of input) of these: 8770 ( 2.9%) have multiple alignments (860 have >20) 80.5% overall read mapping rate. Aligned pairs: 263664 of these: 7672 ( 2.9%) have multiple alignments 5065 ( 1.9%) are discordant alignments 66.9% concordant pair alignment rate.