Left reads: Input : 286817 Mapped : 242680 (84.6% of input) of these: 11518 ( 4.7%) have multiple alignments (1535 have >20) Right reads: Input : 286817 Mapped : 229512 (80.0% of input) of these: 11021 ( 4.8%) have multiple alignments (1535 have >20) 82.3% overall read mapping rate. Aligned pairs: 203316 of these: 9841 ( 4.8%) have multiple alignments 5328 ( 2.6%) are discordant alignments 69.0% concordant pair alignment rate.