Left reads: Input : 160188 Mapped : 133958 (83.6% of input) of these: 6161 ( 4.6%) have multiple alignments (348 have >20) Right reads: Input : 160188 Mapped : 128405 (80.2% of input) of these: 5973 ( 4.7%) have multiple alignments (348 have >20) 81.9% overall read mapping rate. Aligned pairs: 113103 of these: 5310 ( 4.7%) have multiple alignments 2725 ( 2.4%) are discordant alignments 68.9% concordant pair alignment rate.