Left reads: Input : 189154 Mapped : 151279 (80.0% of input) of these: 3350 ( 2.2%) have multiple alignments (235 have >20) Right reads: Input : 189154 Mapped : 145151 (76.7% of input) of these: 3208 ( 2.2%) have multiple alignments (235 have >20) 78.4% overall read mapping rate. Aligned pairs: 124889 of these: 2846 ( 2.3%) have multiple alignments 2195 ( 1.8%) are discordant alignments 64.9% concordant pair alignment rate.