Left reads: Input : 162640 Mapped : 128511 (79.0% of input) of these: 10639 ( 8.3%) have multiple alignments (2082 have >20) Right reads: Input : 162640 Mapped : 119272 (73.3% of input) of these: 10015 ( 8.4%) have multiple alignments (2082 have >20) 76.2% overall read mapping rate. Aligned pairs: 102168 of these: 8792 ( 8.6%) have multiple alignments 2818 ( 2.8%) are discordant alignments 61.1% concordant pair alignment rate.