Left reads: Input : 419836 Mapped : 358536 (85.4% of input) of these: 27883 ( 7.8%) have multiple alignments (3701 have >20) Right reads: Input : 419836 Mapped : 340134 (81.0% of input) of these: 26786 ( 7.9%) have multiple alignments (3701 have >20) 83.2% overall read mapping rate. Aligned pairs: 303159 of these: 24126 ( 8.0%) have multiple alignments 5968 ( 2.0%) are discordant alignments 70.8% concordant pair alignment rate.