Left reads: Input : 607989 Mapped : 530812 (87.3% of input) of these: 64949 (12.2%) have multiple alignments (10108 have >20) Right reads: Input : 607989 Mapped : 516317 (84.9% of input) of these: 64254 (12.4%) have multiple alignments (10110 have >20) 86.1% overall read mapping rate. Aligned pairs: 463838 of these: 58173 (12.5%) have multiple alignments 11654 ( 2.5%) are discordant alignments 74.4% concordant pair alignment rate.