Left reads: Input : 399405 Mapped : 334724 (83.8% of input) of these: 38914 (11.6%) have multiple alignments (1570 have >20) Right reads: Input : 399405 Mapped : 318367 (79.7% of input) of these: 37615 (11.8%) have multiple alignments (1570 have >20) 81.8% overall read mapping rate. Aligned pairs: 279062 of these: 33362 (12.0%) have multiple alignments 7089 ( 2.5%) are discordant alignments 68.1% concordant pair alignment rate.