Left reads: Input : 579176 Mapped : 491217 (84.8% of input) of these: 22549 ( 4.6%) have multiple alignments (575 have >20) Right reads: Input : 579176 Mapped : 459739 (79.4% of input) of these: 21435 ( 4.7%) have multiple alignments (575 have >20) 82.1% overall read mapping rate. Aligned pairs: 407574 of these: 19085 ( 4.7%) have multiple alignments 6555 ( 1.6%) are discordant alignments 69.2% concordant pair alignment rate.