Left reads: Input : 438856 Mapped : 370802 (84.5% of input) of these: 15891 ( 4.3%) have multiple alignments (1472 have >20) Right reads: Input : 438856 Mapped : 353894 (80.6% of input) of these: 15178 ( 4.3%) have multiple alignments (1472 have >20) 82.6% overall read mapping rate. Aligned pairs: 313607 of these: 13587 ( 4.3%) have multiple alignments 6262 ( 2.0%) are discordant alignments 70.0% concordant pair alignment rate.