Left reads: Input : 442927 Mapped : 372438 (84.1% of input) of these: 10771 ( 2.9%) have multiple alignments (915 have >20) Right reads: Input : 442927 Mapped : 354510 (80.0% of input) of these: 10197 ( 2.9%) have multiple alignments (915 have >20) 82.1% overall read mapping rate. Aligned pairs: 313602 of these: 8829 ( 2.8%) have multiple alignments 7120 ( 2.3%) are discordant alignments 69.2% concordant pair alignment rate.