Left reads: Input : 149099 Mapped : 119149 (79.9% of input) of these: 3053 ( 2.6%) have multiple alignments (258 have >20) Right reads: Input : 149099 Mapped : 118068 (79.2% of input) of these: 3038 ( 2.6%) have multiple alignments (258 have >20) 79.6% overall read mapping rate. Aligned pairs: 99987 of these: 2604 ( 2.6%) have multiple alignments 1692 ( 1.7%) are discordant alignments 65.9% concordant pair alignment rate.