Left reads: Input : 416847 Mapped : 350015 (84.0% of input) of these: 31538 ( 9.0%) have multiple alignments (1814 have >20) Right reads: Input : 416847 Mapped : 332418 (79.7% of input) of these: 30396 ( 9.1%) have multiple alignments (1814 have >20) 81.9% overall read mapping rate. Aligned pairs: 292504 of these: 27143 ( 9.3%) have multiple alignments 7574 ( 2.6%) are discordant alignments 68.4% concordant pair alignment rate.