Left reads: Input : 231829 Mapped : 188696 (81.4% of input) of these: 7727 ( 4.1%) have multiple alignments (313 have >20) Right reads: Input : 231829 Mapped : 181542 (78.3% of input) of these: 7449 ( 4.1%) have multiple alignments (313 have >20) 79.9% overall read mapping rate. Aligned pairs: 157484 of these: 6474 ( 4.1%) have multiple alignments 4935 ( 3.1%) are discordant alignments 65.8% concordant pair alignment rate.