Left reads: Input : 196985 Mapped : 164915 (83.7% of input) of these: 7193 ( 4.4%) have multiple alignments (144 have >20) Right reads: Input : 196985 Mapped : 155543 (79.0% of input) of these: 6812 ( 4.4%) have multiple alignments (144 have >20) 81.3% overall read mapping rate. Aligned pairs: 138554 of these: 6169 ( 4.5%) have multiple alignments 3230 ( 2.3%) are discordant alignments 68.7% concordant pair alignment rate.