Left reads: Input : 441792 Mapped : 376426 (85.2% of input) of these: 13640 ( 3.6%) have multiple alignments (970 have >20) Right reads: Input : 441792 Mapped : 356550 (80.7% of input) of these: 13035 ( 3.7%) have multiple alignments (970 have >20) 83.0% overall read mapping rate. Aligned pairs: 317716 of these: 11580 ( 3.6%) have multiple alignments 7311 ( 2.3%) are discordant alignments 70.3% concordant pair alignment rate.