Left reads: Input : 304939 Mapped : 259590 (85.1% of input) of these: 6529 ( 2.5%) have multiple alignments (528 have >20) Right reads: Input : 304939 Mapped : 246832 (80.9% of input) of these: 6175 ( 2.5%) have multiple alignments (528 have >20) 83.0% overall read mapping rate. Aligned pairs: 220513 of these: 5531 ( 2.5%) have multiple alignments 3780 ( 1.7%) are discordant alignments 71.1% concordant pair alignment rate.