Left reads: Input : 177053 Mapped : 137577 (77.7% of input) of these: 3313 ( 2.4%) have multiple alignments (196 have >20) Right reads: Input : 177053 Mapped : 133310 (75.3% of input) of these: 3154 ( 2.4%) have multiple alignments (196 have >20) 76.5% overall read mapping rate. Aligned pairs: 111673 of these: 2687 ( 2.4%) have multiple alignments 3462 ( 3.1%) are discordant alignments 61.1% concordant pair alignment rate.