Left reads: Input : 283537 Mapped : 237953 (83.9% of input) of these: 10962 ( 4.6%) have multiple alignments (490 have >20) Right reads: Input : 283537 Mapped : 225068 (79.4% of input) of these: 10468 ( 4.7%) have multiple alignments (490 have >20) 81.7% overall read mapping rate. Aligned pairs: 201282 of these: 9424 ( 4.7%) have multiple alignments 4391 ( 2.2%) are discordant alignments 69.4% concordant pair alignment rate.