Left reads: Input : 422381 Mapped : 371362 (87.9% of input) of these: 51883 (14.0%) have multiple alignments (11077 have >20) Right reads: Input : 422381 Mapped : 357495 (84.6% of input) of these: 51042 (14.3%) have multiple alignments (11077 have >20) 86.3% overall read mapping rate. Aligned pairs: 322401 of these: 44679 (13.9%) have multiple alignments 9278 ( 2.9%) are discordant alignments 74.1% concordant pair alignment rate.