Left reads: Input : 497430 Mapped : 427125 (85.9% of input) of these: 13991 ( 3.3%) have multiple alignments (1485 have >20) Right reads: Input : 497430 Mapped : 404872 (81.4% of input) of these: 13226 ( 3.3%) have multiple alignments (1485 have >20) 83.6% overall read mapping rate. Aligned pairs: 363834 of these: 11975 ( 3.3%) have multiple alignments 7761 ( 2.1%) are discordant alignments 71.6% concordant pair alignment rate.